Building a Strong MDR Technical File: Avoid Pitfalls and Prepare for Notified Body Audits

Under the EU Medical Device Regulation (MDR) 2017/745, your technical file is not just a collection of documents—it’s the complete evidence package that proves your device is safe, effective, and compliant. Without a well-prepared and well-maintained technical file, your CE marking approval is at risk, along with your access to the European market.
EU MDR technical file

Is your technical file ready for Notified Body scrutiny?

Whether you’re preparing for an initial CE marking submission, an MDR transition, or a routine surveillance audit, the strength of your technical file will make or break the process.

In this in-depth guide, we’ll explore:

  • What MDR Annex II really requires

  • Common mistakes that delay approvals

  • How to link CER, PMS, and risk management data

  • Practical steps to get audit-ready

  • How Patient Guard can help manufacturers succeed

Understanding MDR Annex II Requirements

MDR Annex II outlines exactly what your technical documentation must include. It’s structured to provide a logical, evidence-backed case that your device meets all General Safety and Performance Requirements (GSPRs) in Annex I.

A compliant MDR technical file should contain:

1. Device Description and Specification

This section details your device’s intended purpose, classification, variants, and accessories. It should clearly define the device in a way that aligns with your Instructions for Use (IFU) and any promotional claims.

2. Information Supplied by the Manufacturer

Includes IFUs, labelling, and packaging artwork. These must be consistent with your device description and risk management documentation.

3. Design and Manufacturing Information

Covers all stages of product development and production, including raw material selection, manufacturing processes, and quality control measures.

4. General Safety and Performance Requirements (GSPRs)

A checklist mapping each GSPR to the corresponding evidence in your file. GSPRs should be fully addressed, with clear justifications or references to testing reports, risk assessments, or clinical evidence.

5. Benefit–Risk Analysis and Risk Management

Prepared according to ISO 14971, this section shows how risks are identified, evaluated, and controlled, and how benefits outweigh any residual risks.

6. Product Verification and Validation Data

Includes pre-clinical testing, performance testing, software validation (if applicable), and clinical evaluation evidence.

7. Post Market Surveillance Data

Post Market Surveillance Plan, Post Market Clinical Follow-up Plan, Post Market Surveillance Reports (Class I medical devices), Periodic Summary Update Reports (Class IIa, IIb and III medical devices), PMCF Reports.

💡 Pro Tip: Auditors prefer files that are easy to navigate and logically linked. If they have to hunt for evidence, they may raise non-conformities.

MDR technical file

Common Pitfalls in Technical Documentation

Even well-established manufacturers can trip up during Notified Body reviews. The most frequent problems we see at Patient Guard include:

  • Fragmented documents – Risk files, CERs, PMS reports, and design documents stored separately with no clear referencing.

  • Outdated content – IFUs, risk assessments, and GSPRs not reflecting the current device configuration.

  • Incomplete GSPR checklists – Missing links to supporting evidence, or vague statements like “compliant” without proof.

  • Poor CER structure – Clinical Evaluation Reports that fail to link PMS findings or risk assessments.

  • Neglecting Annex III requirements – Post-Market Surveillance (PMS) and Post-Market Clinical Follow-up (PMCF) activities not feeding back into the technical documentation.

🔗 Related reading: Post-Market Surveillance Under MDR

Why Linking CER, PMS, and Risk Data is Essential

The MDR adopts a lifecycle approach to compliance. This means your technical file must be continuously updated as new data emerges—not just at initial submission.

1. CER Integration

Your Clinical Evaluation Report should reference risk analysis data, PMS findings, and any PMCF activities. This ensures clinical claims are backed by real-world evidence.

2. PMS Feedback Loops

Post-Market Surveillance is not an afterthought. PMS findings—complaints, trend analysis, vigilance reports—must trigger updates to risk management files and, when relevant, the CER.

3. Risk Management Updates

When new risks are identified (or existing risks change), your ISO 14971 risk management documents must be revised, and those changes should be traceable in the CER and PMS plans.

Practical Steps to Prepare for a Notified Body Audit

A successful audit-ready technical file is not created overnight. Here’s a structured approach that works:

Step 1: Start with an MDR Annex II Checklist

Use a detailed checklist to ensure you’ve addressed every requirement. This prevents last-minute scrambling to find missing documents.

Step 2: Validate Links Between Documents

Ensure that references are consistent across the CER, GSPR checklist, PMS plans, and risk files. Mismatched document codes or dates raise red flags.

Step 3: Align PMS and PMCF

Your Post-Market Surveillance Plan and Post-Market Clinical Follow-up Plan should complement each other and reflect your device’s classification and risk profile.

Step 4: Review for Consistency

Check that every data point—device specifications, intended use, performance claims—is identical across all documents.

Step 5: Conduct a Pre-Audit Review

An independent technical file audit by a regulatory consultant can identify issues before your Notified Body does.

🔗 Related reading: Clinical Evaluation Report MDR Guide

Annex III: Don’t Forget Post-Market Requirements

MDR Annex III requires ongoing PMS, vigilance, and PMCF activities. Failing to integrate these into your technical documentation can result in major non-conformities.

Key Annex III deliverables include:

  • PMS Plan

  • PMS Reports (for Class I) or Periodic Safety Update Reports (PSUR) for higher classes

  • PMCF Plans and Evaluation Reports

  • Vigilance reporting records

These must all be traceable in your technical file and aligned with your CER and risk management records.

How Patient Guard Supports Manufacturers

At Patient Guard, we specialise in helping medical device manufacturers:

  • Build or review technical files from scratch

  • Align documentation with MDR Annexes II & III

  • Link CER, PMS, and risk data for audit readiness

  • Prepare for Notified Body and Competent Authority audits

Our services include gap analyses, document drafting, compliance roadmaps, and pre-audit readiness checks. Whether you’re a start-up preparing your first MDR submission or an established manufacturer transitioning from MDD to MDR, we ensure your technical documentation meets the highest standards.

Final Thoughts

Your technical file is the core of your MDR compliance. It’s more than a regulatory requirement—it’s your evidence that the device you place on the market is safe, effective, and backed by solid data.

By structuring your file in line with MDR Annex II, keeping it updated with Annex III activities, and ensuring all documents are linked and consistent, you’ll be in a strong position for Notified Body review.

Patient Guard can help you achieve this with expert support, industry best practices, and a proven compliance process.

Frequently Asked Questions (FAQs)

A technical file under the EU MDR 2017/745 is a structured collection of documents that demonstrates your medical device meets all General Safety and Performance Requirements (GSPRs). It contains everything from device descriptions and risk management data to clinical evidence and post-market surveillance plans.

Without a compliant technical file, you cannot achieve or maintain CE marking, and your device cannot legally be sold in the EU. Notified Bodies use this documentation to assess both your product’s compliance and your ongoing regulatory performance.

Your technical file should be treated as a living document—updated whenever there are changes to your device, new clinical or safety data, or updates to applicable standards and regulations.
At a minimum, it should be reviewed and updated as part of your annual Post-Market Surveillance (PMS) activities, and whenever significant changes occur, such as:

  • Design or manufacturing modifications

  • New risks identified during PMS or vigilance activities

  • Changes to labelling, IFUs, or intended purpose

  • Updates to harmonised standards or guidance documents

The most frequent issues include:

  • Missing or incomplete General Safety and Performance Requirement (GSPR) evidence

  • Poorly linked documentation (CER, PMS, and risk files not cross-referenced)

  • Outdated or inconsistent information across documents

  • Insufficient clinical evidence to support safety and performance claims

  • Lack of traceability between test reports, risk controls, and clinical evaluation findings

By ensuring your technical file is complete, consistent, and regularly maintained, you greatly reduce the risk of non-conformities during Notified Body review.

Patient Guards Recent Posts

Patient Guards Regulatory Tools

QA/RA Templates

Facebook
X
LinkedIn

Most Popular

Post‑Market Surveillance Lessons from Real‑World Audits

Post-Market Surveillance (PMS) is one of the most underestimated areas of medical device compliance — yet it’s also one of the first places regulators look during an audit. Recent audits have shown a clear trend: Notified Bodies and regulators expect more than basic checklists. They want data-driven, risk-based PMS systems that prove medical devices remain safe and effective throughout their lifecycle.

Read More »

Why ISO 13485 is More Than a Checkbox

When medical device manufacturers hear about ISO 13485 certification, it’s often described as a requirement — a hurdle to market entry. But treating ISO 13485 as nothing more than a checkbox misses its true value.

Read More »

The Role of Risk Management in Device Lifecycle

In the fast-paced and highly regulated medical device industry, risk management is not simply a compliance checkbox — it is a continuous, proactive process that underpins device safety, performance, and regulatory success. From the initial concept to post-market monitoring, effective risk management ensures that devices meet safety requirements, protect patient health, and maintain compliance with international standards such as ISO 14971:2019.

This article explores the role of risk management throughout the device lifecycle, explaining why it matters, how it is applied at each stage, and what best practices manufacturers can follow to remain competitive and compliant.

Read More »
patient guard
Patient Guard

Sign up to our newsletter

Be the first to hear industry news and how Patient Guard can help you.

Get the Medical Device Technical Checklist

Thank you! The checklist is now ready to download.

Speak to one of our medical device consultants

For help with the checklist or other aspects of your compliance journey, please reach out to us at Patient Guard and our experts would be happy to help.

UK Office

Do you need support with Medical Device or IVD compliance?

We can help you!